Genomic Data:

• Using variants unfiltered for MAF for PCA and heritability analysis

  11-26-2018

• Generating beta-values for significant SNPs

  09-26-2018

• Filtering GWAS (w/ covariates) results

  09-25-2018

• Adding age and sex as covariates

  09-21-2018

• SNP heritability

  09-19-2018

• Annotating signficant GWAS hits

  09-11-2018

• Performing GWAS on heritable traits

  09-07-2018

• MLMA GWAS for most heritable trait

  09-06-2018

• Estimating heritability of principal components using GCTA

  09-05-2018

• Trying GCTA to perform heritability analysis

  09-03-2018

• Including principal components for estimating heritability

  08-22-2018

• Using gaston for estimating heritability-1

  08-19-2018

• Trying gaston to generate genetic relationship matrix

  08-16-2018

• Performing PCA on filtered NIES genomic data

  08-14-2018

• Re-trying default merge

  08-14-2018

• Troubleshooting missing genotype filtering

  08-11-2018

• Performing PCA on genomic data

  08-08-2018

• Generating stats for merged data and extracting data for NIES

  08-03-2018

• Fixing WGS ID and merging data

  08-02-2018

• Extracting data for variants common in both file sets

  08-01-2018

• Generating basic statistics for final genomic data sets

  07-31-2018

• Converting SNP array data

  07-26-2018

• Merging genomic data sets

  07-25-2018

• Cleaning and preparing genomic data

  07-24-2018

• Extracting genomic data exclusive to NIES

  07-05-2018

• Generating basic statistics for merged data set

  07-04-2018

• Extracting common variants from both data sets

  07-03-2018

• Generating basic statistics for genomic data sets

  06-27-2018

• Trying bmerge function

  06-15-2018

• Getting started with PLINK

  06-13-2018